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Vienna Drosophila Resource Center

RNAi Libraries

For more information about our RNAi Libraries, please check out our information page.

For explanations of fields, please checkout out our field definitions.

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  1. GD Stocks (GD) 10576items
  2. KK Stocks (KK) 8743items
  3. shRNA Stocks (shRNA) 569items
  4. RNAi Toolkit Stocks (RNAi-TK) 5items
CAN Repeats
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  2. 0 513items
  3. 2 11295items
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Inserted Chromosome
  1. 1 907items
  2. 2 13461items
  3. 3 5525items
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Items 3985-3996 of 19893

Set Descending Direction
Name VDRC Id Library Sub-Category CG Number (r6.01) Genotype Comment Construct Id Publication Provider Scientist Provider Organization Gene Symbol CG Number (r6.01) Synonyms Left Primer Right Primer Left Primer PCR1 Right Primer PCR1 Left Primer PCR2 Right Primer PCR2 Sequence Verification Primer Insertion @ 30B Insertion @ 40D Hairpin Length Insertion Site Vector Template Sequence FlyBase Reference Reports RRID Comment Gene Name Keywords Price (net) Add to Cart
60101
60101
RNAi-TK
40D-UAS
Control line for KK library landing site. Landing sites at 40D and 30B in KK library host strain have been separated by meiotic recombination. Line contains Gal4-responsive UAS repeats but no functional RNAi coding sequence at 40D and no transgene insertion at 30B. Enables researchers to test whether their genetic screen of interest will be affected by ectopic tiptop expression (see Vissers et al Nat. Comm. 2016. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth. https://www.ncbi.nlm.nih.gov/pubmed/26758424).
60101
Vissers et al Nat. Comm. 2016. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth.
40D
40D-UAS
empty
empty
genomic
empty
Control line for KK library landing site. Landing sites at 40D and 30B in KK library host strain have been separated by meiotic recombination. Line contains Gal4-responsive UAS repeats but no functional RNAi coding sequence at 40D and no transgene insertion at 30B. Enables researchers to test whether their genetic screen of interest will be affected by ectopic tiptop expression (see Vissers et al Nat. Comm. 2016. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth. https://www.ncbi.nlm.nih.gov/pubmed/26758424).
40D-UAS
40D
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60102
60102
RNAi-TK
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 40D landing site. No insertion at 30B site.
60102
CTGACTGAATTCGGACGACGGGAACTACAAGA
CTGACTGAATTCGGACGACGGGAACTACAAGA
genomic
GGACGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAGGGAGACACCCTCGTCAACAGGATCGAGCTTAAGGGAATCGATTTCAAGGAGGACGGAAACATCCTCGGCCACAAGTTGGAATACAACTACAACTCCCACAACGTATACATCATGGCCGACAAGCAAAAGAACGGCATCAAAGCCAACTTCAAGACCCGCCACAACATCGAAGACGGCGGCGTGCAACTCGCTGATCATTATCAACAAAATACTCCAATTGGCGATGACCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTT
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 40D landing site. No insertion at 30B site.
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60103
60103
RNAi-TK
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 30B landing site. No insertion at 40D site.
60103
CTGACTGAATTCGGACGACGGGAACTACAAGA
CTGACTGAATTCGGACGACGGGAACTACAAGA
genomic
GGACGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAGGGAGACACCCTCGTCAACAGGATCGAGCTTAAGGGAATCGATTTCAAGGAGGACGGAAACATCCTCGGCCACAAGTTGGAATACAACTACAACTCCCACAACGTATACATCATGGCCGACAAGCAAAAGAACGGCATCAAAGCCAACTTCAAGACCCGCCACAACATCGAAGACGGCGGCGTGCAACTCGCTGATCATTATCAACAAAATACTCCAATTGGCGATGACCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTT
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 30B landing site. No insertion at 40D site.
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60200
60200
RNAi-TK
w[1118];P{VDRCsh60200}attP40
Control line for shRNA stocks - contains pWALIUM20 but with no hairpin insertion, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
60200
empty
empty
genomic
empty
Control line for shRNA stocks - contains pWALIUM20 but with no hairpin insertion, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
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60201
60201
RNAi-TK
w[1118];P{VDRCsh60201}attP40
Control line for shRNA stocks - contains pWALIUM20 with a small hairpin RNA insertion under control of UAS for RNAi of EGFP and EYP, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
60201
CAAGCTGGAGTACAACTACAA
TTGTAGTTGTACTCCAGCTTG
oligo
ctagcagtCAAGCTGGAGTACAACTACAAtagttatattcaagcataTTGTAGTTGTACTCCAGCTTGgcg
Control line for shRNA stocks - contains pWALIUM20 with a small hairpin RNA insertion under control of UAS for RNAi of EGFP and EYP, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
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100000
100000
KK
CG5414
102886
CG5414
tggcgcccctagatgTCAGCTCTTATGGCGGACTT
taggtctagccccgcCTGCTCACTGGCACGAATTA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGATAGGTCTAGCCCCGC(XTS2)
ETU
N
Y
438
genomic
TCAGCTCTTATGGCGGACTTTGAGGCCAATACTCAGCTAAAGTGTGAGATAGTGCAGCACTTGAGTGGAGAATTATTGAGCAAGCTGAGCTATAATCATCCAATTGATAAAGAACAATCGAATCTGCCCTTTTTCGACGCCAGTCATGTGCAGGATAGCAAAGGTACGGGCCTGGTGCACACAGCTCCTGCCCATGGACCAGAAGATTTCCTTGTTAGTCTGACCCAGAAAATTCCTGTAAAGTGTTTTGTGAATGAGGAGGGCACTTACACCAAGGAAGCTCCTGATTTTCTACGCGGAAAATCAGTGTTGGATCAGGGAAATTCCCTAGTCCTCGACCGCATAGCAGAGGATGTAGTCCACTCCTCAAAGCTGGAACATTCCTATCCTATTGATTGGCGCACAAAAAAGCCTGTGATAATTCGTGCCAGTGAGCAG
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100001
100001
KK
CG9373
102889
CG9373
Hrp59
Rumpelstiltskin
cg9373
heterogeneous nuclear ribonucleoprotein M
hnRNP M
hrp59
p75
rump
rumpelstiltskin
tggcgcccctagatgGACTTTCGAGAAGCACCGAC
cgacgcccgctgataGGCGGATTGAACCTAAACAA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGACGACGCCCGCTGATA(XTS1)
ETU
Y
N
437
genomic
GACTTTCGAGAAGCACCGACAGCATTGGCCGAGCCAACGTTGGAATTGCCCACGTTGCTGCCGCCGCCATAGACATCCAATGGATTGCCAGTGTTGTAATCGTTGCCATCAACACCAACTCCTCCGTTGCCGCCGCCCATTCCACCAGAGCTGCTGTAAGCATTGTATCCCAAATTGCTGGAGCCGCCACCGCCGCTGTAGTTGTTTCCAGAGCTATAGCTATTGCCACCACCGGTGCCGCCGCTGCTGTAGTTGTTTGAAAGACCCACATTGCTTGGCGGCAGGTTGTCATCATTGCCGGAGTTGCCCAGATTGAGACCCAGGTTGCTCAGCGAAGAGGACAGCAAGGGATTGCTTAAATTCCCTCCCTGGTTACCAAGATTGCCGACCACGGCAGCCAAAATGCTGGGATTCAGATTGTTTAGGTTCAATCCGCC
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100002
100002
KK
CG3936
102890
CG3936
1.1
16-178
16-55
Abruptex
Ax
CT13012
Chopped
Chp
Co
Confluens
EG:140G11.1
EG:163A10.2
N
NECD
NICD
NOTCH
Notch
RICN
anon-EST:Liang-1.12
clone 1.12
co
co Confluens
dNotch
fa
facet
l(
tggcgcccctagatgCTACAAGGGCGTGGATTGTT
taggtctagccccgcAGCCCGCTATAGAGTCGTGA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGATAGGTCTAGCCCCGC(XTS2)
ETU
Y
N
437
genomic
CTACAAGGGCGTGGATTGTTCAGAGGACATAGATGAATGCGATCAGGGATCACCGTGCGAACACAATGGCATATGCGTGAACACACCGGGCAGCTACAGATGCAATTGCTCCCAGGGCTTTACGGGTCCGCGCTGCGAGACGAACATCAATGAGTGCGAATCGCATCCATGCCAGAACGAGGGATCTTGCCTGGATGATCCGGGAACGTTCCGATGCGTCTGTATGCCAGGATTCACGGGCACACAGTGCGAAATCGACATTGACGAATGCCAATCGAATCCCTGCTTGAACGATGGAACTTGCCACGACAAGATCAATGGCTTTAAATGCAGTTGTGCCCTGGGCTTTACGGGCGCACGATGTCAAATCAATATAGACGACTGTCAGTCGCAACCATGCCGGAATCGTGGCATCTGTCACGACTCTATAGCGGGCT
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100004
100004
KK
CG5859
102901
CG5859
EG:EG0003.5
Int8
IntS8
Integrator 8
tggcgcccctagatgCCGCCGCGTGTAATACTAAT
cgcatgtagcctgccATGTTTCGCACCACATTCAA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGACGCATGTAGCCTGCC(XTS3)
ETU
Y
N
331
genomic
CCGCCGCGTGTAATACTAATCTGCAGGCAATCCCGCCACAGACAACTCTATATTACTGCCACATACGACCGTCAGAACTGGAAGGTCTACTGCAGGCCTGTGGAATTAGCGCCGAGGAGCAGTCACTGCTGGAGAAGTTCCAGCAATCGCTACTTAACAACTACACAGACATTGTATCAATTCTGCGAATGGACAACAGAAGGCGAGAAATCCCCTTTATAAGCCGGCGGCAAGTGGAACTGGACATTGAGGGTTCCATCTCCACGGGCATACTCAAGGAGACAGTTCAGCTGCAATTGCAGGTGGCTGCATTGAATGTGGTGCGAAACAT
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100005
100005
KK
CG8885
102902
CG8885
SCO
SCOX
Sco1 protein homolog
Scox
Synthesis of cytochrome c oxidase
dSco1
l(2)SH1783
l(2)SH2 1783
lethal (2) SH1783
scox
tggcgcccctagatgTTGCCTAAGAAGTCCTCCGA
tagcctccctagcgcTTCAAATTTCTGAAACCGGG
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGATAGCCTCCCTAGCGC(XTS4)
ETU
Y
Y
331
genomic
TTGCCTAAGAAGTCCTCCGATTTGCGAACAGCTCCCTGCGAATCAACTAATTCCCAACTGCCGCCGATGGCTGCTTTTCCCAATTGCCGCTGACGCTCCTTCATTCTCGCCTCATCCTTCTCGCTCTTCACGTACAGCATGAAGCCCACTCCTCCGGCTCCAAGGGCTCCAATGACGGCCAGACTTCTCCAAGAGATCGGACCCTTGCCTTTAGTGGAATCTGCGGGAGCGGCATAATGACGAATTGCGGGCTGTTGTGCCCAGCGACGACAGCTGCCCACTAAGCGTTGCAGGGAGCGGGACATCTTACGCCCGGTTTCAGAAATTTGAA
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100006
100006
KK
CG33172
102903
CG33172
CG8473
tggcgcccctagatgGCAGATTGCACTGTCTTGGA
cgacgcccgctgataTTTCAGCTGTTGTCCAGTCG
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGACGACGCCCGCTGATA(XTS1)
ETU
Y
331
genomic
GCAGATTGCACTGTCTTGGAGCTGGCTCGATGCACCGACAGTTCCATACTCTATTACACGAAACTCCATGGGAGTTCCTTTAATAAACTGGCCATCATAAGCGGTAATGCCTTTGGAGAACTTTTGGTATGGCAAACGCAGTTTCCCACAGAATCCGATCCAAAATCTGTAATGAAAACATATCCCTTGCTCTTGCGCATTGAAGCGCACAATGGAGTGATACACTCAATTGAGTTTGACTTGCAGTCGCAGTTATTGGTTACCACATCGGATGATCGTTCGGTCAAGTTTTGGAATATACAAAAGTCTGGCGACTGGACAACAGCTGAAA
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100007
100007
KK
CG10137
102904
CG10137
tggcgcccctagatgGGAGCAGTTCTATTCGCGTC
taggtctagccccgcAGTGTGCAATCGAGCAGATG
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGATAGGTCTAGCCCCGC(XTS2)
ETU
Y
Y
331
genomic
GGAGCAGTTCTATTCGCGTCAGTTTCAGGACCGCGAGGATGGCTTGATGCGTCTGCGTAACTTCCTAAAGGAGCACGACCTGTTAGAGGCGTCGAGCAACGAGCACGCTGCCAGTCCCAACAAAGTGGCCCGCAGCGCCGCCCTTCTGCTGCATCGCGCTGTAAGAGATGCCGTTTACTCCGTGTTTAGCCAAGCTACTGAGACGGTACGCATGCTGTTCCTAGAGTATGTGCCCGGTCGAGTTTCCCCCAACGAGGTGGCACGTTGCGTGGACCGCCTGCTGCCCGAATTGCTGGCCAAGTCCGGCGATCCATCTGCTCGATTGCACACT
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