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Vienna Drosophila Resource Center

RNAi Libraries

For more information about our RNAi Libraries, please check out our information page.

For explanations of fields, please checkout out our field definitions.

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Category
  1. GD Stocks (GD) 20778item
  2. KK Stocks (KK) 8810item
  3. shRNA Stocks (shRNA) 569item
  4. RNAi Toolkit Stocks (RNAi-TK) 5item
CAN Repeats
  1. -1 5item
  2. 0 669item
  3. 2 17315item
  4. 3 8745item
  5. 4 1794item
  6. 5 472item
  7. 6 213item
  8. 7 139item
  9. 8 56item
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  12. 11 34item
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  20. 19 3item
  21. 22 2item
  22. 23 2item
  23. 26 2item
Status
  1. available 29843item
  2. temporarily unavailable 319item
Inserted Chromosome
  1. 1 1770item
  2. 2 17514item
  3. 3 10878item
ON Targets
  1. 0 5item
  2. 1 28638item
  3. 2 846item
  4. 3 43item
  5. 4 23item
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  8. 10 1 item
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OFF Targets
  1. 0 19619item
  2. 1 6023item
  3. 2 1641item
  4. 3 588item
  5. 4 300item
  6. 5 199item
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Items 1585-1596 of 30162

Set Descending Direction
Name VDRC Id Library Sub-Category CG Number (r6.01) Genotype Comment Construct Id Publication Provider Scientist Provider Organization Gene Symbol CG Number (r6.01) Synonyms Left Primer Right Primer Left Primer PCR1 Right Primer PCR1 Left Primer PCR2 Right Primer PCR2 Sequence Verification Primer Insertion @ 30B Insertion @ 40D Hairpin Length Insertion Site Vector Template Sequence FlyBase Reference Reports RRID Comment Gene Name Keywords Price (net) Add to Cart
52664
52664
GD
CG14683
15887
CG14683
CGCGAATTCGAACTCGGTGGACGGGATGCT
GCGTCTAGAAAATATGCGGATGGCTTGGAAGGT
385
cDNA
GAACTCGGTGGACGGGATGCTTTTTGATTTTGGTTGCAGTTCCATGCAATTCGATGAGGCGGTCAGAGGCTTCTCCATCTCGAGGGACGGTCCACTGGACATGCGAATGGATGGTGGCCACAGCGGAGGGGTTACAGCTGCCGATGTGTTGGCTAATGTTGAAGAGGGCGACCTTGTGAAGATTTTAAGGATGTATGGTGAAGAGAAAGCAGCCAAGAAGATAGCCAGAGGACTGGTAGACGCGCGCAACGCCCTCTTTAAAATCGAGACCACCAAGCAGCTGGCAGATATAATTGAAAACATCATGGATGGCGGGACCAGGAAGGATAAGCTTCGACGACCGGCACACTCAGCCACCAAGACCTTCCAAGCCATCCGCATATTT
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52669
52669
GD
CG3285
864
CG3285
CGCGAATTCCCGCATCCCACACAACTCTGAA
CGCTCTAGACACAACGAATAGGCATCCCACCA
284
genomic
CCGCATCCCACACAACTCTGAATCTGGGCATGTGCACCATCATCATCGGAGTGCTCCAGATCGTGGGCAACTACGTGACCACTCTGTTGTGCGATAAGTACGGAAGGAGGATACTCATGCTGACCTCCACCTTGGGAGCCTCCGTTTGCCTAACTGCCTTCGGCACCTTCACCTTCTTCGCCGAGGCGGCTGATCTCTCTTCGGTTGACTGGTTACCCCTTGTGATCTTGTCCTGCTTCGTATTCCTCTGCAACATCGGCTTGGTGGGATGCCTATTCGTTGTG
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52670
52670
GD
CG1935
439
CG1935
BcDNA:RH07980
JTBR
Jumping Translocation Breakpoint
anon-EST:fe2G4
anon-fast-evolving-2G4
dJTB-like
dJTBR
CGCGGATCCTCAGCGTCACCACATGCTCCTT
CGCTCTAGAGTTACGATCTCGCCGCTCTGG
276
genomic
TCAGCGTCACCACATGCTCCTTGGACTAGGAGCCCTAACGATGGTCACCATACTCGTCCTGTTCGTGGAATCTCGTTACGCGGCAGATGGTCCTCGTCGCCGAGAGCCGCAATTCGTGATCGAGGACAACTCGACCTGCTGGCGGAATGAGAAGTACACGATGGTGCAGGAGTGCCACCCGTGCTCCGAATTCGATATAGTCAGCCGGAGCTTGGGCGTCTGCATTCACACGCACTACAAGGAGGTGCTGCGCTGCCAGAGCGGCGAGATCGTAAC
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52673
52673
GD
CG8415
17535
CG8415
CT24703
Ribosomal protein S23
Rp S23
RpS23
anon-EST:Posey158
anon-EST:Posey63
ribosomal protein S23
CGCGAATTCTGGGCACCAGATGGAAGGCTAAT
GCGTCTAGAAGGGCCAACAGGGAGACGTTG
304
cDNA
TGGGCACCAGATGGAAGGCTAATCCCTTCGGAGGTGCTTCCCACGCCAAGGGAATCGTCCTGGAGAAGGTCGGCGTCGAGGCCAAGCAGCCTAACTCTGCCATCCGCAAGTGCGTGAGGGTGCAGCTCATCAAGAACGGCAAGAAGATCACCGCCTTCGTGCCCCGTGACGGTAGCTTGAACTACATTGAGGAGAACGACGAGGTCCTGGTTGCCGGTTTCGGTCGTAAGGGTCATGCCGTCGGTGATATTCCCGGTGTGCGCTTCAAGGTTGTCAAGGTCGCCAACGTCTCCCTGTTGGCCCT
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60101
60101
RNAi-TK
40D-UAS
Control line for KK library landing site. Landing sites at 40D and 30B in KK library host strain have been separated by meiotic recombination. Line contains Gal4-responsive UAS repeats but no functional RNAi coding sequence at 40D and no transgene insertion at 30B. Enables researchers to test whether their genetic screen of interest will be affected by ectopic tiptop expression (see Vissers et al Nat. Comm. 2016. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth. https://www.ncbi.nlm.nih.gov/pubmed/26758424).
60101
Vissers et al Nat. Comm. 2016. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth.
40D
40D-UAS
empty
empty
genomic
empty
Control line for KK library landing site. Landing sites at 40D and 30B in KK library host strain have been separated by meiotic recombination. Line contains Gal4-responsive UAS repeats but no functional RNAi coding sequence at 40D and no transgene insertion at 30B. Enables researchers to test whether their genetic screen of interest will be affected by ectopic tiptop expression (see Vissers et al Nat. Comm. 2016. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth. https://www.ncbi.nlm.nih.gov/pubmed/26758424).
40D-UAS
40D
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60102
60102
RNAi-TK
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 40D landing site. No insertion at 30B site.
60102
CTGACTGAATTCGGACGACGGGAACTACAAGA
CTGACTGAATTCGGACGACGGGAACTACAAGA
genomic
GGACGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAGGGAGACACCCTCGTCAACAGGATCGAGCTTAAGGGAATCGATTTCAAGGAGGACGGAAACATCCTCGGCCACAAGTTGGAATACAACTACAACTCCCACAACGTATACATCATGGCCGACAAGCAAAAGAACGGCATCAAAGCCAACTTCAAGACCCGCCACAACATCGAAGACGGCGGCGTGCAACTCGCTGATCATTATCAACAAAATACTCCAATTGGCGATGACCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTT
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 40D landing site. No insertion at 30B site.
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60103
60103
RNAi-TK
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 30B landing site. No insertion at 40D site.
60103
CTGACTGAATTCGGACGACGGGAACTACAAGA
CTGACTGAATTCGGACGACGGGAACTACAAGA
genomic
GGACGACGGGAACTACAAGACACGTGCTGAAGTCAAGTTTGAGGGAGACACCCTCGTCAACAGGATCGAGCTTAAGGGAATCGATTTCAAGGAGGACGGAAACATCCTCGGCCACAAGTTGGAATACAACTACAACTCCCACAACGTATACATCATGGCCGACAAGCAAAAGAACGGCATCAAAGCCAACTTCAAGACCCGCCACAACATCGAAGACGGCGGCGTGCAACTCGCTGATCATTATCAACAAAATACTCCAATTGGCGATGACCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTT
Control line for KK library. UAS sequences drive expression of a 320bp fragment of mRNA for green-fluorescent protein from jellyfish (seq. X96418.1 nts 208-413) organised as an inverted repeat for RNAi. Construct inserted into KK line host strain at 30B landing site. No insertion at 40D site.
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60200
60200
RNAi-TK
w[1118];P{VDRCsh60200}attP40
Control line for shRNA stocks - contains pWALIUM20 but with no hairpin insertion, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
60200
empty
empty
genomic
empty
Control line for shRNA stocks - contains pWALIUM20 but with no hairpin insertion, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
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60201
60201
RNAi-TK
w[1118];P{VDRCsh60201}attP40
Control line for shRNA stocks - contains pWALIUM20 with a small hairpin RNA insertion under control of UAS for RNAi of EGFP and EYP, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
60201
CAAGCTGGAGTACAACTACAA
TTGTAGTTGTACTCCAGCTTG
oligo
ctagcagtCAAGCTGGAGTACAACTACAAtagttatattcaagcataTTGTAGTTGTACTCCAGCTTGgcg
Control line for shRNA stocks - contains pWALIUM20 with a small hairpin RNA insertion under control of UAS for RNAi of EGFP and EYP, integrated into the same attP40 genetic background as the VDRC shRNA stocks.
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100000
100000
KK
CG5414
102886
CG5414
tggcgcccctagatgTCAGCTCTTATGGCGGACTT
taggtctagccccgcCTGCTCACTGGCACGAATTA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGATAGGTCTAGCCCCGC(XTS2)
ETU
N
Y
438
genomic
TCAGCTCTTATGGCGGACTTTGAGGCCAATACTCAGCTAAAGTGTGAGATAGTGCAGCACTTGAGTGGAGAATTATTGAGCAAGCTGAGCTATAATCATCCAATTGATAAAGAACAATCGAATCTGCCCTTTTTCGACGCCAGTCATGTGCAGGATAGCAAAGGTACGGGCCTGGTGCACACAGCTCCTGCCCATGGACCAGAAGATTTCCTTGTTAGTCTGACCCAGAAAATTCCTGTAAAGTGTTTTGTGAATGAGGAGGGCACTTACACCAAGGAAGCTCCTGATTTTCTACGCGGAAAATCAGTGTTGGATCAGGGAAATTCCCTAGTCCTCGACCGCATAGCAGAGGATGTAGTCCACTCCTCAAAGCTGGAACATTCCTATCCTATTGATTGGCGCACAAAAAAGCCTGTGATAATTCGTGCCAGTGAGCAG
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100001
100001
KK
CG9373
102889
CG9373
Hrp59
Rumpelstiltskin
cg9373
heterogeneous nuclear ribonucleoprotein M
hnRNP M
hrp59
p75
rump
rumpelstiltskin
tggcgcccctagatgGACTTTCGAGAAGCACCGAC
cgacgcccgctgataGGCGGATTGAACCTAAACAA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGACGACGCCCGCTGATA(XTS1)
ETU
Y
N
437
genomic
GACTTTCGAGAAGCACCGACAGCATTGGCCGAGCCAACGTTGGAATTGCCCACGTTGCTGCCGCCGCCATAGACATCCAATGGATTGCCAGTGTTGTAATCGTTGCCATCAACACCAACTCCTCCGTTGCCGCCGCCCATTCCACCAGAGCTGCTGTAAGCATTGTATCCCAAATTGCTGGAGCCGCCACCGCCGCTGTAGTTGTTTCCAGAGCTATAGCTATTGCCACCACCGGTGCCGCCGCTGCTGTAGTTGTTTGAAAGACCCACATTGCTTGGCGGCAGGTTGTCATCATTGCCGGAGTTGCCCAGATTGAGACCCAGGTTGCTCAGCGAAGAGGACAGCAAGGGATTGCTTAAATTCCCTCCCTGGTTACCAAGATTGCCGACCACGGCAGCCAAAATGCTGGGATTCAGATTGTTTAGGTTCAATCCGCC
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100002
100002
KK
CG3936
102890
CG3936
1.1
16-178
16-55
Abruptex
Ax
CT13012
Chopped
Chp
Co
Confluens
EG:140G11.1
EG:163A10.2
N
NECD
NICD
NOTCH
Notch
RICN
anon-EST:Liang-1.12
clone 1.12
co
co Confluens
dNotch
fa
facet
l(
tggcgcccctagatgCTACAAGGGCGTGGATTGTT
taggtctagccccgcAGCCCGCTATAGAGTCGTGA
GCGCGAATTCTGGCGCCCCTAGATG(ETU)
GCGCTCTAGATAGGTCTAGCCCCGC(XTS2)
ETU
Y
N
437
genomic
CTACAAGGGCGTGGATTGTTCAGAGGACATAGATGAATGCGATCAGGGATCACCGTGCGAACACAATGGCATATGCGTGAACACACCGGGCAGCTACAGATGCAATTGCTCCCAGGGCTTTACGGGTCCGCGCTGCGAGACGAACATCAATGAGTGCGAATCGCATCCATGCCAGAACGAGGGATCTTGCCTGGATGATCCGGGAACGTTCCGATGCGTCTGTATGCCAGGATTCACGGGCACACAGTGCGAAATCGACATTGACGAATGCCAATCGAATCCCTGCTTGAACGATGGAACTTGCCACGACAAGATCAATGGCTTTAAATGCAGTTGTGCCCTGGGCTTTACGGGCGCACGATGTCAAATCAATATAGACGACTGTCAGTCGCAACCATGCCGGAATCGTGGCATCTGTCACGACTCTATAGCGGGCT
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